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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889884.1_cds_XP_016444588.1_39633
CDS Infomation

[gene=LOC107769845] [db_xref=GeneID:107769845] [protein=protein TRANSPORT INHIBITOR RESPONSE 1-like] [partial=3'] [protein_id=XP_016444588.1] [location=join(16558..17066,18980..19472,20442..>20648)] [gbkey=CDS]
Sequence

ATGAATCCCAGCTTGAAAAAATCGAGGGAATCGGTAGATTCATTGAATGAGTCAACAGCA
TCACCATTCCCAGATGAGGTGTTGGAGAAGGTGCTGTCACTTGTGCGGTCTCACAAGGAC
AGAAACTCAGCTTCATTGGTTTGCAAAGATTGGTACAATGCAGAGCGTTGGACAAGGACT
AAGTTGTTCATTGGGAATTGCTATTCGGTCTCTCCTGATATTGTAGCAAGAAGATTTCCC
AAGATTAAGAGCGTTACCCTTAAAGGGAAGCCAAGATTTTCTGACTTTAATTTGGTCCCA
GAGAATTGGGGTGCTGATATTCAGGCTTGGCTTGATGTTTTTTCCAAAGTTTACCCCTTT
CTCGAGGAGTTGAGGTTGAAGAGGATGACTGTTAGTGATGAGAGTTTGGAGTTTTTGGCT
AAATCCTTTCATGGATTTAAGACTCTCTCTTTGTTGAGTTGTGATGGGTTTAGCACTGAT
GGGATCAAATCCATTGCTACTCACTGCAAGAGGTTGACAGAGCTGGACATTCAGGAGAAT
GGCATGGATGATATTGCTGGTAGTTGGCTAAGTTGTTTCCCGGATGACTTTGCGTCACTG
GAGGTGTTAAACTTTGCCAGTCTGAACAGTGAGATCAGTTTCGATGCCCTAGAGAGACTT
GTCAGTAGGTGCAAATCACTGAGGGTTCTGAAGGTGAATAAGAACATTAACTTGGATCAA
TTGCAACGCCTGCTTGTCCGGGCTCCTCAGTTGATGGAGCTCGGTACAGGATCCTTTCAT
CAAGAACTCACGAGTCGGCAGTACGCACAAGTTGAAAGTGCATTCAGCAACTGCAAACAT
CTGCACACTCTCTCGGGTTTATGGGAAGCGACTTCTCTATATTTACCAGTTCTTTATGCA
GCCTGTGCTAGTCTGACTTTCCTCAACTTGAGCTATGCAACCATTGGGAGTGGTGAATTA
TCGAAGCTTCTTGCTCATTGCCCAAATTTAAGACGCCTTTGGGTCCTTGACACTGTCGAA
GATAAGGGATTAGAGGCTGTTGGAACCAGCTGCCCCTTGCTCGAAGAACTGCGAGTCTTT
CCTGCTGACCCTTTTGACCAGGATATAGTCCATGGGGTGACGGAGTCGGGCTTTGTGGCT
GTGTCTGCCGGTTGTCCTAAGCTTCAATATGTTCTCTATTTTTGCCGGCAAATGACTAAT
GCTGCTGTT

Peptide Sequence

PEP ID

XP_016444588.1
PEP Infomation

PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like, partial [Nicotiana tabacum]
Sequence

MNPSLKKSRESVDSLNESTASPFPDEVLEKVLSLVRSHKDRNSASLVCKDWYNAERWTRT
KLFIGNCYSVSPDIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADIQAWLDVFSKVYPF
LEELRLKRMTVSDESLEFLAKSFHGFKTLSLLSCDGFSTDGIKSIATHCKRLTELDIQEN
GMDDIAGSWLSCFPDDFASLEVLNFASLNSEISFDALERLVSRCKSLRVLKVNKNINLDQ
LQRLLVRAPQLMELGTGSFHQELTSRQYAQVESAFSNCKHLHTLSGLWEATSLYLPVLYA
ACASLTFLNLSYATIGSGELSKLLAHCPNLRRLWVLDTVEDKGLEAVGTSCPLLEELRVF
PADPFDQDIVHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAV

Transcript Sequence

Gene sequence data has not been registered.